BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008A05SP1|AL425792
(460 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1690 876 0.0
>3x_Contig1690
Length = 13018
Score = 876 bits (439), Expect = 0.0
Identities = 452/460 (98%)
Strand = Plus / Minus
Query: 1 atgaggaccatcacgatcagcgtgttttcgtttattaggtkaatccctcttagcattttt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 10818 atgaggaccatcacgatcagcgtgttttcgtttattaggtgaatccctcttagcattttt 10759
Query: 61 gaatttcgattgtagatcttcagtggtgaaggtactcaagacttgctcttctgcbatatc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 10758 gaatttcgattgtagatcttcagtggtgaaggtactcaagacttgctcttctgcgatatc 10699
Query: 121 tgaagaatttatcttgtagctcttattgttaatactgtcactkagaatactggatatatt 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 10698 tgaagaatttatcttgtagctcttattgttaatactgtcactgagaatactggatatatt 10639
Query: 181 ttcatcttgaacaaggatttcagagagtttattgattgtwtcagatttcaactgttctgg 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 10638 ttcatcttgaacaaggatttcagagagtttattgattgtatcagatttcaactgttctgg 10579
Query: 241 gaacttcacacggaatctgatgtataaatttccnaaatttccattactgtcaacaggcat 300
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 10578 gaacttcacacggaatctgatgtataaatttccgaaattgccattactgtcaacaggcat 10519
Query: 301 acctttattttcaacacattttatacaaccaggtttcaacaattcaccactcaatacctc 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10518 acctttattttcaacacatttgatacaaccaggtttcaacaattcaccactcaatacctc 10459
Query: 361 aatcttgaatgggttcccacttggatggtcttcaataataatggtcccaccacataaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10458 aatcttgaatgggttcccacttggatggtcttcaataataatggtcccaccacataaact 10399
Query: 421 tgtctttaagtccacttcaaagttatccaatatgagakcg 460
||||||||||||||||||||||||||||||||||||| ||
Sbjct: 10398 tgtctttaagtccacttcaaagttatccaatatgagatcg 10359
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3669
Number of Sequences: 1807
Number of extensions: 3669
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 460
length of database: 10,358,551
effective HSP length: 15
effective length of query: 445
effective length of database: 10,331,446
effective search space: 4597493470
effective search space used: 4597493470
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)